Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3797821	3797863	43	2 [0]	[1] 2	rfaS	LPS core biosynthesis protein RfaS

AAGAGTCCAGCCAGATTGGTTTTCTTTGGTTATATCAACAATTATATTA  >  NZ_CP009273/3797772‑3797820                                                 | aaGAGTCCAGCCAGATTGGTTTTCTTTGGTTATATCAACAATTATATTa  <  1:559266/49‑1 (MQ=255) aaGAGTCCAGCCAGATTGGTTTTCTTTGGTTATATCAACAATTATATTa  >  2:559266/1‑49 (MQ=255)                                                 | AAGAGTCCAGCCAGATTGGTTTTCTTTGGTTATATCAACAATTATATTA  >  NZ_CP009273/3797772‑3797820

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑