Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4272621	4272658	38	3 [1]	[0] 2	espX5	T3SS effector pentapeptide repeat protein EspX5

CTAAGGTGTGAAAAATCGTAACCACCATTTACTGTCTGTGGGATTTCGATAGTATTATTATGGACGGTGACATTATTTATAAAATATACC  >  NZ_CP009273/4272546‑4272635                                                                           |                cTAAGGTGTGAAAAATCGTAACCACCATTTACTGTCTGTGGGATTTCGATAGTATTATTATGGACGGTGACATTATTTATAAAATATacc  <  1:274396/90‑1 (MQ=255)               aTCGTAACCACCATTTACTGTCTGTGGGATTTCGATAGTATTATTATGGACGGTGACatta                 >  1:537969/1‑61 (MQ=255)               aTCGTAACCACCATTTACTGTCTGTGGGATTTCGATAGTATTATTATGGACGGTGACatta                 <  2:537969/61‑1 (MQ=255)                                                                           |                CTAAGGTGTGAAAAATCGTAACCACCATTTACTGTCTGTGGGATTTCGATAGTATTATTATGGACGGTGACATTATTTATAAAATATACC  >  NZ_CP009273/4272546‑4272635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑