Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 1338609 1338670 62 2 [1] [1] 5 yciT/BW25113_RS06720 DNA‑binding transcriptional regulator YciT/hypothetical protein

GCGCCGGGCATCCTCAAATAGGAAAACCTGAAGGCACGATTGTTAAATCTCCCACGGTGCCTTCGGGATGTCTGGCGTAGATTCAGCAACCTGGCGCAAGAGTTCTGCTT  >  NZ_CP009273/1338651‑1338760
                    |                                                                                         
gcgcCGGGCATCCTCAAATAGGAAAACCTGAAGGCACGATTGTTAAATCTCCCACGGTGCCTTCGGGATGTCTGGCGTAGATTCAGCAAc                      >  2:202637/1‑90 (MQ=255)
                    ggAAAACCTGAAGGCACGATTGTTAAATCTCCCACGGTGCCTTCGGGATGTCTGGCGTAGATTCAGCAACCTGGCGCAAGAGTTc       <  1:261346/85‑1 (MQ=255)
                    ggAAAACCTGAAGGCACGATTGTTAAATCTCCCACGGTGCCTTCGGGATGTCTGGCGTAGATTCAGCAACCTGGCGCAAGAGTTc       >  2:261346/1‑85 (MQ=255)
                    ggAAAACCTGAAGGCACGATTGTTAAATCTCCCACGGTGCCTTCGGGATGTCTGGCGTAGATTCAGCAACCTGGCGCAAGAGTTCTGCtt  >  1:286306/1‑90 (MQ=255)
                    ggAAAACCTGAAGGCACGATTGTTAAATCTCCCACGGTGCCTTCGGGATGTCTGGCGTAGATTCAGCAACCTGGCGCAAGAGTTCTGCtt  >  2:353921/1‑90 (MQ=255)
                    |                                                                                         
GCGCCGGGCATCCTCAAATAGGAAAACCTGAAGGCACGATTGTTAAATCTCCCACGGTGCCTTCGGGATGTCTGGCGTAGATTCAGCAACCTGGCGCAAGAGTTCTGCTT  >  NZ_CP009273/1338651‑1338760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: