Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1627113	1627138	26	2 [0]	[1] 5	ydfJ/BW25113_RS25615	MHS family MFS transporter/hypothetical protein

TTACTAATTCGAGGCTATATGAACAGCATACTGATAATCACATCTCTCCTTATCATATTCAGCATTTTTAGTCATGCCCTAATAAAATTAGGGATTGGCA  >  NZ_CP009273/1627129‑1627228           |                                                                                          ttACTAATTCGAGGCTATATGAACAGCATACTGATAATCACATCTCTCCTTATCATATTCAGCATTTTTAGTCATGCCCTAATAAAATTa            >  2:562066/1‑90 (MQ=255)           gAGGCTATATGAACAGCATACTGATAATCACATCTCTCCTTATCATATTCAGc                                       <  1:263652/53‑1 (MQ=255)           gAGGCTATATGAACAGCATACTGATAATCACATCTCTCCTTATCATATTCAGc                                       >  2:263652/1‑53 (MQ=255)           gAGGCTATATGAACAGCATACTGATAATCACATCTCTCCTTATCATATTCAGCATTTTTAGTCATGCCCTAATAAAATTAGGGATTGGCa  >  2:397768/1‑90 (MQ=255)           gAGGCTATATGAACAGCATACTGATAATCACATCTCTCCTTATCATATTCAGCATTTTTAGTCATGCCCTAATAAAATTAGGGATTGGCa  >  2:529571/1‑90 (MQ=255)           |                                                                                          TTACTAATTCGAGGCTATATGAACAGCATACTGATAATCACATCTCTCCTTATCATATTCAGCATTTTTAGTCATGCCCTAATAAAATTAGGGATTGGCA  >  NZ_CP009273/1627129‑1627228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑