Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2161747	2161775	29	2 [1]	[0] 2	BW25113_RS10880	hypothetical protein

TATCTTTTTCATCTCACCTTCCCCCATTAAATACC  >  NZ_CP009273/2161776‑2161810 |                                   tATCTTTTTCATCTCACCTTCCCCCATTAAATAcc  >  1:333919/1‑35 (MQ=255) tATCTTTTTCATCTCACCTTCCCCCATTAAATAcc  <  2:333919/35‑1 (MQ=255) |                                   TATCTTTTTCATCTCACCTTCCCCCATTAAATACC  >  NZ_CP009273/2161776‑2161810

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑