Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2488080	2488136	57	3 [1]	[0] 2	yfdX/ypdI	YfdX family protein/colanic acid biosynthesis lipoprotein YpdI

ATCGTAGGTTCTCAGTGAACCATTTTCAGGATAACTTTCTATG  >  NZ_CP009273/2488137‑2488179 |                                           aTCGTAGGTTCTCAGTGAACCATTTTCAGGATAACTTTCTATg  >  1:2030/1‑43 (MQ=255) aTCGTAGGTTCTCAGTGAACCATTTTCAGGATAACTTTCTATg  <  2:2030/43‑1 (MQ=255) |                                           ATCGTAGGTTCTCAGTGAACCATTTTCAGGATAACTTTCTATG  >  NZ_CP009273/2488137‑2488179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑