Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2622460	2622540	81	2 [1]	[1] 6	[BW25113_RS25940]	[BW25113_RS25940]

AAAATATGTATCCACTGACGCTTTTTTACATAACGAAGAATTGACCATTTTGTCCTGTTGTGCCTTAATGTAAGTACCGTCCACAGCGTGGGACA  >  NZ_CP009273/2622536‑2622630      |                                                                                          aaaaTATGTATCCACTGACGCTTTTTTACATAACGAAGAATTGACCATTTTGTCCTGTTGTGCCTTAATGTAAGTACCGTCCACAGCGTg       >  1:637101/1‑90 (MQ=255)      atGTATCCACTGACGCTTTTTTACATAACGAAGAATTGACCAt                                                 >  1:123343/1‑43 (MQ=255)      atGTATCCACTGACGCTTTTTTACATAACGAAGAATTGACCAt                                                 <  2:123343/43‑1 (MQ=255)      atGTATCCACTGACGCTTTTTTACATAACGAAGAATTGACCATTTTGTCCTGTTGTGCCTTAATGTAAGTACCGTCCACAGCGTGGGACa  >  1:561112/1‑90 (MQ=255)      atGTATCCACTGACGCTTTTTTACATAACGAAGAATTGACCATTTTGTCCTGTTGTGCCTTAATGTAAGTACCGTCCACAGCGTGGGACa  >  2:501447/1‑90 (MQ=255)      atGTATCCACTGACGCTTTTTTACATAACGAAGAATTGACCATTTTGTCCTGTTGTGCCTTAATGTAAGTACCGTCCACAGCGTGGGACa  >  2:534942/1‑90 (MQ=255)      |                                                                                          AAAATATGTATCCACTGACGCTTTTTTACATAACGAAGAATTGACCATTTTGTCCTGTTGTGCCTTAATGTAAGTACCGTCCACAGCGTGGGACA  >  NZ_CP009273/2622536‑2622630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑