Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3796327	3796372	46	2 [0]	[1] 3	waaO	lipopolysaccharide 3‑alpha‑galactosyltransferase

TATGATCATAATCAATAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAAT  >  NZ_CP009273/3796358‑3796447                |                                                                           tATGATCATAATCAATAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAaataat  >  2:174761/1‑90 (MQ=255)                tAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACctgct                                   <  1:217844/42‑1 (MQ=255)                tAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACctgct                                   >  2:217844/1‑42 (MQ=255)                |                                                                           TATGATCATAATCAATAACTGAATTAAGAAACTCAGTTTCCTGGAAAAACACCTGCTGCATTATTTCCTCCGGGAAATAGCAGAAATAAT  >  NZ_CP009273/3796358‑3796447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑