Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3797711	3797762	52	3 [1]	[0] 2	rfaS	LPS core biosynthesis protein RfaS

AAGTATACGAAGAGTCCAGCCAGATTGGTTTTCTTTGGTTATATCAACAAT  >  NZ_CP009273/3797763‑3797813 |                                                   aaGTATACGAAGAGTCCAGCCAGATTGGTTTTCTTTGGTTATATCAACAAt  <  1:543755/51‑1 (MQ=255) aaGTATACGAAGAGTCCAGCCAGATTGGTTTTCTTTGGTTATATCAACAAt  >  2:543755/1‑51 (MQ=255) |                                                   AAGTATACGAAGAGTCCAGCCAGATTGGTTTTCTTTGGTTATATCAACAAT  >  NZ_CP009273/3797763‑3797813

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑