Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1272622	1272670	49	2 [1]	[1] 3	narX	nitrate/nitrite two‑component system sensor histidine kinase NarX

CGGTTGTAGCAGTCGCGCCCGCAACCAGATAATAGTGAACACCAGTAAAAGTGCCATAAATACCGCCATTACCCGATGGACCAGTACCACTGTCTCGATGCGCATTTCCGTGGTGCGGTCAAAACCAGAT  >  NZ_CP009273/1272532‑1272661                                                                                          |                                         cGGTTGTACCAGTCGCGCCCGCAACCAGATAATAGGAAACCCCAGTAAAAGTCCAAAAAATACCGCCATTACCCGATGGACCAGTACCAc                                          <  2:289387/90‑1 (MQ=255)                                         cccATTAAAAGTGCCAAAAATACCGCCATTACCCGATGGACCAGTACCACTGTCTCGATGCGCATTTCCGTGGTGCGGTCAAAACCAGAt  <  2:119789/89‑1 (MQ=255)                                                                                          |                                         CGGTTGTAGCAGTCGCGCCCGCAACCAGATAATAGTGAACACCAGTAAAAGTGCCATAAATACCGCCATTACCCGATGGACCAGTACCACTGTCTCGATGCGCATTTCCGTGGTGCGGTCAAAACCAGAT  >  NZ_CP009273/1272532‑1272661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑