Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1594164	1594222	59	2 [0]	[0] 2	lsrK	autoinducer‑2 kinase

TCTTTAAGTTCGCTAACTTCGCGTGCCGCTCTGGCATCCACATTGGCGCAGGCCCAGATCGGGGCTCCTTC  >  NZ_CP009273/1594093‑1594163                                                                       | tCTTTAAGTTCGCTAACTTCGCGTGCCGCTCTGGCATCCACATTGGCGCAGGCCCAGATCGGGGCTCCTTc  <  1:361445/71‑1 (MQ=255) tCTTTAAGTTCGCTAACTTCGCGTGCCGCTCTGGCATCCACATTGGCGCAGGCCCAGATCGGGGCTCCTTc  >  2:361445/1‑71 (MQ=255)                                                                       | TCTTTAAGTTCGCTAACTTCGCGTGCCGCTCTGGCATCCACATTGGCGCAGGCCCAGATCGGGGCTCCTTC  >  NZ_CP009273/1594093‑1594163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑