Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2607220	2607272	53	2 [1]	[0] 6	[hyfR]	[hyfR]

TCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGCCGGGCCCCGTGGCGCAGCGACGCGATTAGGGATGAAGCGCACCACGCTGCTGTCACGAATGCAGCGGC  >  NZ_CP009273/2607130‑2607242                                                                                          |                        tCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGCCGGGCCCCGTGGCGCAGCGACGCGATTAGGGATGAAGCGcaccac                         <  2:341728/90‑1 (MQ=255)                        gagaAACCAATGGCATTGTTGCCGGGCCCCGTGGCGCAGCGACGCGATTAGGGATGAAGCGCACCACGCTGCTGTCACGAATGCAGCGGc  <  2:338182/90‑1 (MQ=255)                                                                                          |                        TCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGCCGGGCCCCGTGGCGCAGCGACGCGATTAGGGATGAAGCGCACCACGCTGCTGTCACGAATGCAGCGGC  >  NZ_CP009273/2607130‑2607242

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑