Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2651276	2651288	13	2 [1]	[1] 2	hscA	Fe‑S protein assembly chaperone HscA

GCGCCAATAGCGACGACTTTATCCGGGTCGATGGAAGTCAGCGGTGGACGACCGAAAAATTCGCCTACCCGTTCACGCACCAGCGGCACGCG  >  NZ_CP009273/2651186‑2651277                                                                                          |   gcgcCAATAGCGACGACTTTATCCGGGTCGATGGAAGTCAGCGGTGGACGACCGAAAAATTCGCCTACCCGTTCACGCACCAGCGGCAcg    <  1:310813/90‑1 (MQ=255)   gcCAATAGCGACGACTTTATCCGGGTCGATGGAAGTCAGCGGTGGACGACCGAAAAATTCGCCTACCCGTTCACGCACCAGCGGCAcgcg  <  1:460953/90‑1 (MQ=255)                                                                                          |   GCGCCAATAGCGACGACTTTATCCGGGTCGATGGAAGTCAGCGGTGGACGACCGAAAAATTCGCCTACCCGTTCACGCACCAGCGGCACGCG  >  NZ_CP009273/2651186‑2651277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑