Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	519271	519274	4	2 [0]	[0] 2	rhsD	rhs element protein RhsD

GGCGCGGCTGTGGGGGGCGCTGCCGCCGGATATCCGGTTAAGCCCGCATCTTTACCTGGCGACCAACAGCGCACAGGGGCCGTGGTGGAT  >  NZ_CP009273/519181‑519270                                                                                          | ggCGCGGCTGTGGGGGGCGCTGCCGCCGGATATCGGGTTAACCCCGCATTTTTACTTGGGGCCCAAAAGGGCAAGGGGGCCGGGGGGGAt  >  2:144269/1‑90 (MQ=255) ggCGCGGCTGTGGGGGGCGCTGCCGCCGGATATCCGGTTAAGCCCGCATCTTTACCTGGCGACCAACAGCGCACAGGGGCCGTGGTGGAt  >  2:268228/1‑90 (MQ=255)                                                                                          | GGCGCGGCTGTGGGGGGCGCTGCCGCCGGATATCCGGTTAAGCCCGCATCTTTACCTGGCGACCAACAGCGCACAGGGGCCGTGGTGGAT  >  NZ_CP009273/519181‑519270

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑