Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 1129804 1129889 86 2 [0] [1] 4 flgF flagellar basal‑body rod protein FlgF

CTGGAAGGCAGTAACGTCAATGCCGTTGCGGCAATGAGCGACATGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGC  >  NZ_CP009273/1129873‑1129979
                 |                                                                                         
cTGGAAGGCAGTAACGTCAATGCCGTTGCGGCAATGGGCGACATGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATcagc                   >  2:51787/1‑90 (MQ=255)
                 cAATGCCGTTGCGGCAATGAGCGACATGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGc  >  1:39223/1‑90 (MQ=255)
                 cAATGCCGTTGCGGCAATGAGCGACATGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGc  >  2:27922/1‑90 (MQ=255)
                 cAATGCCGTTGCGGCAATGAGCGACATGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGc  >  2:380871/1‑90 (MQ=255)
                 |                                                                                         
CTGGAAGGCAGTAACGTCAATGCCGTTGCGGCAATGAGCGACATGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGC  >  NZ_CP009273/1129873‑1129979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: