Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1617528	1617542	15	2 [0]	[1] 3	dgcZ	diguanylate cyclase DgcZ

GTTGCCAGGGTGCGTAATACTACATCGCCGATTAAATGCCCGTAGGTATCATTAACCAATTTAAATCGGTCAATATCCAACAACATTAAA  >  NZ_CP009273/1617539‑1617628     |                                                                                      gtTGCCAGGGTGCGTAATACTACATCGCCGATTAAATGCCCGTAGGTATCATTAACCAATTTAAATCGGTCAATATCCAACAACATtaaa  >  2:232972/1‑90 (MQ=255)     ccAGGGTGCGTAATACTTCATCGCCGATTAAATGCCCg                                                  <  1:201928/38‑1 (MQ=255)     ccAGGGTGCGTAATACTACATCGCCGATTAAATGCCCg                                                  >  2:201928/1‑38 (MQ=255)     |                                                                                      GTTGCCAGGGTGCGTAATACTACATCGCCGATTAAATGCCCGTAGGTATCATTAACCAATTTAAATCGGTCAATATCCAACAACATTAAA  >  NZ_CP009273/1617539‑1617628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑