Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1731139	1731145	7	3 [0]	[1] 2	ydhP	MFS transporter

CATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGCACCACGCTTGCGGCCACGACTGAACCCAAACCAAAAAATGCTCCGTGATTCAG  >  NZ_CP009273/1731140‑1731235       |                                                                                          cATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGCACCACGCTTGCGGCCACGACTGAACACAAACCAAAAAATGCTCCGTg        >  2:451684/1‑90 (MQ=255)       cATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGCACCACGCTTGCGGCCACGACTGAACCCAAACCAAAAAATGCTCCGTGATTCAg  >  2:160896/1‑90 (MQ=255)       |                                                                                          CATAAACATAGTGGCAACTGCGCTGGCCTGTTTATGTTTTGGCACCACGCTTGCGGCCACGACTGAACCCAAACCAAAAAATGCTCCGTGATTCAG  >  NZ_CP009273/1731140‑1731235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑