Missing coverage evidence... | ||||||||||
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seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NZ_CP009273 | 1972738 | 1972746 | 9 | 3 [1] | [0] 15 | flhD/uspC | flagellar transcriptional regulator FlhD/universal stress protein UspC |
AACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCG > NZ_CP009273/1972658‑1972812 | gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcc < 1:287770‑M2/1‑1 (MQ=255) gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattagcaccttcc < 1:205693‑M2/1‑1 (MQ=255) catttactggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcct < 1:188684‑M2/2‑1 (MQ=255) atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcctt < 1:342961‑M2/3‑1 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCTTAACATa < 2:26101‑M2/9‑1 (MQ=255) gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCTTAACATa < 2:290816‑M2/9‑1 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCTTAACATAAATGTATAAGTCATACttttgtttt < 2:20171‑M2/34‑1 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcCATAACATAAATGTATAAGTCATACTTTTGTTTTGGgtg < 1:22870‑M2/39‑1 (MQ=255) gactgagtcagccgagaagaatttccccgcttattcgcaccttcCTTAACATAAATGTATAAGTc < 1:46348‑M2/21‑1 (MQ=255) gactgagtcagccgagaagaatttccccgcttattcgcaccttcCTTAACATAAATGTATAAGTc > 2:46348‑M2/45‑65 (MQ=255) gagtcagccgagaagaatttccccgcttattcgcaccttcc > 1:301801‑M2/41‑41 (MQ=255) gagtcagccgagaagaatttccccgcttattcgcaccttcc < 2:301801‑M2/1‑1 (MQ=255) agaagaatttccccgcttattcgcaccttcCTTAACATa > 1:88691‑M2/31‑39 (MQ=255) agaagaatttccccgcttattcgcaccttcCTTAACATa < 2:88691‑M2/9‑1 (MQ=255) atttccccgcttattcgcaccttcCTTAACATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTcg > 1:369696‑M2/25‑90 (MQ=255) | AACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCG > NZ_CP009273/1972658‑1972812 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |