Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2135383	2135416	34	3 [1]	[0] 2	dcd	dCTP deaminase

GCGTCACCGCCAGCGCCAGCTCTCCTGGGTGAAGATAGAACGCCTCGCCCTCGTCGAGA  >  NZ_CP009273/2135417‑2135475 |                                                           gCGTCACCGCCAGCGCCAGCTCTCCTGTGTGAAGATAGAACGCCTCGCCCTCGTCgaga  <  1:384704/59‑1 (MQ=255) gCGTCACCGCCAGCGCCAGCTCTCCTGTGTGAAGATAGAACGCCTCGCCCTCGTCgaga  >  2:384704/1‑59 (MQ=255) |                                                           GCGTCACCGCCAGCGCCAGCTCTCCTGGGTGAAGATAGAACGCCTCGCCCTCGTCGAGA  >  NZ_CP009273/2135417‑2135475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑