Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3247147	3247150	4	2 [0]	[1] 2	yhaJ	DNA‑binding transcriptional regulator YhaJ

CGTTCATTAACGTATAGAGCTTGCGCGAGTTGATCTCCGACGAGGAACGAAAATGCATATCCGGCGCGATAACAATATCCGCCCGCCCCT  >  NZ_CP009273/3247057‑3247146                                                                                          | cGTTCATTAACGTATAGAGCTTGCGGGAGTTGATCCCCGCCGAGGAACGAAAATGCATATCCGGCGCGATAACAATATCCGCCCGCCCCt  <  1:604567/90‑1 (MQ=255) cGTTCATTAACGTATAGAGCTTGCGCGAGTTGATCTCCGACGAGGAACGAAAATGCATATCCGGCGCGATAACAATATCCGCCCGCCCCt  >  2:335891/1‑90 (MQ=255)                                                                                          | CGTTCATTAACGTATAGAGCTTGCGCGAGTTGATCTCCGACGAGGAACGAAAATGCATATCCGGCGCGATAACAATATCCGCCCGCCCCT  >  NZ_CP009273/3247057‑3247146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑