| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 806,171 | A→G | N112S (AAT→AGT) | bioF → | 8‑amino‑7‑oxononanoate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 806,171 | 0 | A | G | 100.0% | 47.2 / NA | 17 | N112S (AAT→AGT) | bioF | 8‑amino‑7‑oxononanoate synthase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (10/7); total (10/7) | |||||||||||
GGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGC > NZ_CP009273/806088‑806245 | ggtgCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGGTATTCGGGGGGACTGCTGTTTTTTTCTGGGTTCGCCCCTaggcaggc > 1:602857/1‑90 (MQ=255)ggtgCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAGTCAGGc < 1:155903/90‑1 (MQ=255)ggtgCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAGTCAGGc > 2:155903/1‑90 (MQ=255) cTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGGTTCGCCGCTAGTCAGGCAGTTATTGCcgcg > 1:359694/1‑90 (MQ=255) gaagaaGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAGTCAGGCAGTTATTGCCGCgatg > 1:14604/1‑90 (MQ=255) agagCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAGTCAGGCAGTTATTGCCGCGATGATGGc < 1:135192/90‑1 (MQ=255) agagCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAGTCAGGCAGTTATTGCCGCGATGATGGc > 1:271401/1‑90 (MQ=255) agCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAGTCAGGCAGTTATTGCCGCGATGATGGCGa > 1:648540/1‑90 (MQ=255) gAGTGGCTTGGCTATTCGCGGGCCCCGCTGTTTATCTCTGGTTTCGCCGCTAGTCAGGCAATTATTGCCGCGATGATGGCGAAAGAggcc < 2:447320/90‑3 (MQ=255) gAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAGTCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGAc < 2:466959/90‑1 (MQ=255) tCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAGTCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGAc > 1:177370/1‑90 (MQ=255) tctcTGGTTTCGCCGCTAGTCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCAt < 2:592314/90‑1 (MQ=255) tctGGTTTCGCCGCTAGTCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTg > 1:523460/1‑90 (MQ=255) tctGGTTTCGCCGCTAGTCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTg > 1:397001/1‑90 (MQ=255) ctGGTTTCGCCGCTAGTCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGc > 1:1298/1‑90 (MQ=255) ggTTTCGCCGCTAGTCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGAcc > 1:531691/1‑52 (MQ=255) ggTTTCGCCGCTAGTCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGAcc < 2:531691/52‑1 (MQ=255) cTAGTCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCa < 2:222209/67‑1 (MQ=255) | GGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGC > NZ_CP009273/806088‑806245 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |