Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1972989	1973024	36	2 [1]	[1] 3	flhD/uspC	flagellar transcriptional regulator FlhD/universal stress protein UspC

CTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTT  >  NZ_CP009273/1972899‑1973018                                                                                          |                               cTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGc                                <  1:119646/90‑1 (MQ=255)                               aTAAACTATATCTAAACAGACACTTAACACACAACTAATTAATTATATAAAAAGAAAGGCAACAATCATCTTAATGTTAATGAAATtttt  <  2:190902/90‑1 (MQ=255)                                                                                          |                               CTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTT  >  NZ_CP009273/1972899‑1973018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑