Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1424353	1424394	42	3 [1]	[1] 2	stfR	prophage tail fiber N‑terminal domain‑containing protein

GCCACCGCCGCCGGAAAATCGGCAGAAAGCGCCGCATCGTCTGCTTCAACAGCCACAACGAAGGCTGGCGAAGCCACTGAACAGGCCAGCGCAGCAGC  >  NZ_CP009273/1424263‑1424360                                                                                          |         gCCCCCGCCGCCGAAAAACCGGCAGAAAGCGCCGCATCGTCTGCTTCAACAGCCACAACGAAGGCTGGCGAAGCCACTGAACAGGCCAgc          <  2:131431/90‑1 (MQ=255) cccACCGCCGCCGAAAAACGGGCAAAAGGCCCCGCACCGTCTGCTCCACCAGCCACAACGAAGGCTGGCGAAGCCACTGAACAGGCCAgc          <  2:176874/89‑1 (MQ=255)         cgccgGAAAATCGGCAGAAAGCGCCGCATCGTCTGCTTCAACAGCCACAACGAAGGCTGGCGAAGCCACTGAACAGGCCAGCGCagcagc  >  2:198840/1‑90 (MQ=255)                                                                                          |         GCCACCGCCGCCGGAAAATCGGCAGAAAGCGCCGCATCGTCTGCTTCAACAGCCACAACGAAGGCTGGCGAAGCCACTGAACAGGCCAGCGCAGCAGC  >  NZ_CP009273/1424263‑1424360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑