Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2779873	2779883	11	3 [0]	[2] 3	BW25113_RS26005	alpha‑amylase family glycosyl hydrolase

ATAACAAATATTATTAATTCTTGTGGAGTTTACCCTCAAGGATTAAAAGACAGAGAAATTATATCAACTTTTCACGCAGAAAAAGTTATTAATGATCT  >  NZ_CP009273/2779876‑2779973         |                                                                                          ataACAAATATTATTAATTCTTGTGGAGTTTACCCTCAAGGATTAAAAGACAGAGAAATTATATCAACTTTTCACGCAGAAAAAGttatt          >  2:378939/1‑90 (MQ=255)        atatTATTAATTCTTGTGGAGTTTACCCTCAAGGATTAAAAGACAGAGAAATTATATCAACTTTTCACGCAGAAAAAGTTATTAATGATc   <  2:274975/90‑1 (MQ=255)         tattatTAATTCTTGTGGAGTTTACCCTCAAGGATTAAAAGACAGAGAAATTATATCAACTTTTCGCGCAGAAAAAGTTATTAATGATCt  >  2:802573/1‑90 (MQ=255)         |                                                                                          ATAACAAATATTATTAATTCTTGTGGAGTTTACCCTCAAGGATTAAAAGACAGAGAAATTATATCAACTTTTCACGCAGAAAAAGTTATTAATGATCT  >  NZ_CP009273/2779876‑2779973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑