Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3629488	3633417	3930	25 [0]	[1] 3	yhiN–uspB	yhiN,pitA,uspB

CATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGA  >  NZ_CP009273/3629398‑3629576                                                                                          |                                                                                          cATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAg                                                                                           >  1:73263/1‑90 (MQ=255)             gCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaa                                                                                       >  1:180401‑M2/1‑78 (MQ=255)             gCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaa                                                                                       <  2:180401‑M2/82‑5 (MQ=255)                           tttCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcgaataagc                                                                          <  2:320021‑M2/81‑18 (MQ=255)                           tttCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcgaataagc                                                                          >  1:320021‑M2/1‑64 (MQ=255)                                   aCCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcgg                                                         <  2:209049‑M2/90‑35 (MQ=255)                                       ttCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcggctga                                                     <  1:59778‑M2/90‑39 (MQ=255)                                        tccatccaCCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgac                                                    >  2:406515‑M2/1‑51 (MQ=255)                                        tccatccaCCTTATATTAAGCATGGAGGGCTTCAGTTCACGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgac                                                    >  1:227951‑M2/1‑51 (MQ=255)                                            tccaCCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcag                                                <  2:10392‑M2/90‑44 (MQ=255)                                              caCCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtc                                              >  2:371910‑M2/1‑45 (MQ=255)                                                         aaGCATGGAGGGTTTCAGTTCACGGGGTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct                                   <  1:8020‑M2/90‑57 (MQ=255)                                                         aaGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct                                   <  2:208428‑M2/90‑57 (MQ=255)                                                              tGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg                              <  1:445872‑M2/90‑62 (MQ=255)                                                              tGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg                              <  1:423465‑M2/90‑62 (MQ=255)                                                              tGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcata                              <  2:796‑M2/90‑62 (MQ=255)                                                                     tttCAGTTCACGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc                       <  2:82304‑M2/90‑69 (MQ=255)                                                                               cGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc             >  1:446441‑M2/1‑12 (MQ=255)                                                                                   cTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc         >  1:209049‑M2/1‑8 (MQ=255)                                                                                        tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa    <  1:255376‑M2/90‑88 (MQ=255)                                                                                        tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa    <  1:224630‑M2/90‑88 (MQ=255)                                                                                         aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat   >  1:295544‑M2/1‑2 (MQ=255)                                                                                         aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat   >  2:48397‑M2/1‑2 (MQ=255)                                                                                         aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat   >  1:208428‑M2/1‑2 (MQ=255)                                                                                          gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg  <  2:483779‑M2/90‑90 (MQ=255)                                                                                          |                                                                                          CATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGACGA  >  NZ_CP009273/3629398‑3629576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑