Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3636104	3638645	2542	2 [0]	[1] 2	[rsmJ]–prlC	[rsmJ],prlC

AGTCAGCGCCGTCAGGCTGGAGGCGTGAATTAACTGCAACCGCTCCTGCAACCAGCCGCCGATTTCCGCATCCGCATAACCACGCGCC  >  NZ_CP009273/3636016‑3636103                                                                                        | agtcagCGCCGTCAGGCTGGAGGCGTGAATTAACTGCAACCGCTCCTGCAACCAGCCGCCGATTTCCGCATCCGCATAACCACGCGcc  <  1:5901/88‑1 (MQ=255) agtcagCGCCGTCAGGCTGGAGGCGTGAATTAACTGCAACCGCTCCTGCAACCAGCCGCCGATTTCCGCATCCGCATAACCACGCGcc  >  2:5901/1‑88 (MQ=255)                                                                                        | AGTCAGCGCCGTCAGGCTGGAGGCGTGAATTAACTGCAACCGCTCCTGCAACCAGCCGCCGATTTCCGCATCCGCATAACCACGCGCC  >  NZ_CP009273/3636016‑3636103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑