Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1242706	1242727	22	2 [1]	[0] 5	treA	alpha,alpha‑trehalase

TACCGGTGTTTCTTCTGCCTGCACCGATAGCGCAGCGAAACACAAAAAGATACAGGCTGGAATTAACGCCATTTTTTGCGGGCGAGAAGG  >  NZ_CP009273/1242728‑1242817 |                                                                                          tACCGGTGTTTCTTCTGCCTGCACCGATAGCGCAGCGAAACACAAAAAGATAc                                       <  1:384508/53‑1 (MQ=255) tACCGGTGTTTCTTCTGCCTGCACCGATAGCGCAGCGAAACACAAAAAGATAc                                       <  1:74160/53‑1 (MQ=255) tACCGGTGTTTCTTCTGCCTGCACCGATAGCGCAGCGAAACACAAAAAGATAc                                       >  2:384508/1‑53 (MQ=255) tACCGGTGTTTCTTCTGCCTGCACCGATAGCGCAGCGAAACACAAAAAGATAc                                       >  2:74160/1‑53 (MQ=255) tACCGGTGTTTCTTCTGCCTGCACCGATAGCGCAGCGAAACACAAAAAGATACAGGCTGGAATTAACGCCATTTTTTGCGGGCGAGAAgg  >  2:366518/1‑90 (MQ=255) |                                                                                          TACCGGTGTTTCTTCTGCCTGCACCGATAGCGCAGCGAAACACAAAAAGATACAGGCTGGAATTAACGCCATTTTTTGCGGGCGAGAAGG  >  NZ_CP009273/1242728‑1242817

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑