Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1193703	1193723	21	4 [1]	[1] 2	BW25113_RS05920/lit	hypothetical protein/cell death peptidase Lit

TAGCGTATTTAAGAAAGTTGCTTTATGAAGTTTAGGCAACATTTCATTATAATTTTTGGGGGGTTCGAACATATTATTCACCTGAGTCACGC  >  NZ_CP009273/1193613‑1193704                                                                                          |   tAGCGTATTTAAGAAAGTTGCTTTATGAAGTTTAGGCAACATTTCATTATAATTTTTGGGGGGTTCGAACATATTATTCACCTGAGTCAc    <  1:16693/90‑1 (MQ=255) tAGCGTATTTAAGAAAGTTGCTTTATGAAGTTTAGGCAACATTTCATTATAATTTTTGGGGGGTTCGAACATATTATTCACCTGAGTCAc    <  1:254626/90‑1 (MQ=255) tAGCGTATTTAAGAAAGTTGCTTTATGAAGTTTAGGCAACATTTCATTATAATTTTTGGGGGGTTCGAACATATTATTCACCTGAGTCAc    <  1:293103/90‑1 (MQ=255)   gagTATTTAAGAAAGTTGCTTTATGAAGTTTAGGCAACATTTCATTATAATTTTTGGGGGGTTCGAACATATTATTCACCTGAGTCACGc  <  1:204547/88‑1 (MQ=255)                                                                                          |   TAGCGTATTTAAGAAAGTTGCTTTATGAAGTTTAGGCAACATTTCATTATAATTTTTGGGGGGTTCGAACATATTATTCACCTGAGTCACGC  >  NZ_CP009273/1193613‑1193704

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑