Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1225696	1225932	237	3 [1]	[0] 2	[hlyE]	[hlyE]

GTAAGGTTTTAATATCGCCGACTAAAACGGAGGCTGCCTGTGAATACTCCTGTTTAAAGCGACTTAACTCTTTTATGGTTTCATCAAAGG  >  NZ_CP009273/1225646‑1225735                                                  |                                         gtaagGTTTTAATATCGCCGACTAAAACGGAGGCTGCCTGTGAATACTCCTGTTTAAAGCGACTTAACTCTTTTATGGTTTCATCAAAgg  <  1:225955/90‑1 (MQ=255)   aagGTTTTAATATCGCCGACTAAAACGGAGGCTGCCTGTGAATACTcc                                          >  1:152879/1‑48 (MQ=255)   aagGTTTTAATATCGCCGACTAAAACGGAGGCTGCCTGTGAATACTcc                                          <  2:152879/48‑1 (MQ=255)                                                  |                                         GTAAGGTTTTAATATCGCCGACTAAAACGGAGGCTGCCTGTGAATACTCCTGTTTAAAGCGACTTAACTCTTTTATGGTTTCATCAAAGG  >  NZ_CP009273/1225646‑1225735

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑