Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2401588	2401609	22	2 [0]	[1] 2	alaA	alanine transaminase AlaA

CGTACGCGTGGGATCGTTATTATCAACCCAAATAACCCAACCGGCGC  >  NZ_CP009273/2401541‑2401587                                               | cGTACGCGTGGGATCGTTATTATCAACCCAAATAACCCAACCGgcgc  >  1:76743/1‑47 (MQ=255) cGTACGCGTGGGATCGTTATTATCAACCCAAATAACCCAACCGgcgc  <  2:76743/47‑1 (MQ=255)                                               | CGTACGCGTGGGATCGTTATTATCAACCCAAATAACCCAACCGGCGC  >  NZ_CP009273/2401541‑2401587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑