Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2538562	2538572	11	4 [1]	[1] 2	murR	HTH‑type transcriptional regulator MurR

CAGGCCACGCGATAGCCAATTTTCATCAGTTTGAACGACAGATCGCGCCCCACCAGCGCCGATCCGCCCAGGCCCGTTATCTGGATAAACGGTGC  >  NZ_CP009273/2538472‑2538566                                                                                          |      cAGGCCACGCGATAGCCAATTTTCATCAGTTTGAACGACAGATCGCGCCCCACCAGCGCCGATCCGCCCAGGCCCGTTATCTGGATAAAc       <  1:126322/90‑1 (MQ=255) cAGGCCACGCGATAGCCAATTTTCATCAGTTTGAACGACAGATCGCGCCCCACCAGCGCCGATCCGCCCAGGCCCGTTATCTGGATAAAc       <  1:192071/90‑1 (MQ=255) cAGGCCACGCGATAGCCAATTTTCATCAGTTTGAACGACAGATCGCGCCCCACCAGCGCCGATCCGCCCAGGCCCGTTATCTGGATAAAc       <  1:263427/90‑1 (MQ=255)      cACGCGATAGCCAATTTTCATCAGTTTGAACGACAGATCGCGCCCCACCAGCGCCGATCCGCCCAGGCCCGTTATCTGGATAAACGGTGc  <  2:43131/90‑1 (MQ=255)                                                                                          |      CAGGCCACGCGATAGCCAATTTTCATCAGTTTGAACGACAGATCGCGCCCCACCAGCGCCGATCCGCCCAGGCCCGTTATCTGGATAAACGGTGC  >  NZ_CP009273/2538472‑2538566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑