Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1362603	1362679	77	2 [1]	[1] 2	pspA	phage shock protein PspA

CGCTGGTGGACGATACGCTGGCACGCATGAAGAAAGAGATTGGCGAGCTGGAAAACAAATTGAGCGAAACACGCGCTCGCCAGCAGGCATTGATGTTACGTCATCAGGC  >  NZ_CP009273/1362661‑1362769                    |                                                                                          cGCTGGTGGACGATACGCTGGCACGCATGAAGAAAGAGATTGGCGAGCTGGAAAACAAATTGAGCGAAACACGCGCTCGCCAGCAGGCAt                     <  1:162865/90‑1 (MQ=255)                    ggCACGCATGAAGAAAGAGATTGGCGAGCTGGAAAACAAATTGAGCGAAACACGCGCTCTCCAGCAGGCATTGATGTTACGTCATCAggc  >  2:299757/1‑90 (MQ=255)                    |                                                                                          CGCTGGTGGACGATACGCTGGCACGCATGAAGAAAGAGATTGGCGAGCTGGAAAACAAATTGAGCGAAACACGCGCTCGCCAGCAGGCATTGATGTTACGTCATCAGGC  >  NZ_CP009273/1362661‑1362769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑