Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1639207	1639214	8	2 [0]	[0] 2	BW25113_RS08190/hokD	hypothetical protein/type I toxin‑antitoxin system toxin HokD

TGCGCGCTACTTAAGTATTTTTGATTCTATTCCGGCACCGTCCAGA  >  NZ_CP009273/1639215‑1639260 |                                              tGCGCGCTACTTAAGTATTTTTGATTCTATTCCGGCACCGTCCAGa  <  1:184302/46‑1 (MQ=255) tGCGCGCTACTTAAGTATTTTTGATTCTATTCCGGCACCGTCCAGa  >  2:184302/1‑46 (MQ=255) |                                              TGCGCGCTACTTAAGTATTTTTGATTCTATTCCGGCACCGTCCAGA  >  NZ_CP009273/1639215‑1639260

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑