Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1938667	1938676	10	2 [1]	[0] 2	ruvB	Holliday junction branch migration DNA helicase RuvB

GCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGG  >  NZ_CP009273/1938677‑1938727 |                                                   gCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATgg  >  1:53361/1‑51 (MQ=255) gCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATgg  <  2:53361/51‑1 (MQ=255) |                                                   GCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGG  >  NZ_CP009273/1938677‑1938727

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑