Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2100095	2100107	13	2 [1]	[0] 2	wzy	O16 family O‑antigen polymerase

GATGATAACCATAAAGACAATTTGCTTACCAGTATTCAGTATA  >  NZ_CP009273/2100108‑2100150 |                                           gatgatAACCATAAAGACAATTTGCTTACCAGTATTCAGtata  <  1:201306/43‑1 (MQ=255) gatgatAACCATAAAGACAATTTGCTTACCAGTATTCAGtata  >  2:201306/1‑43 (MQ=255) |                                           GATGATAACCATAAAGACAATTTGCTTACCAGTATTCAGTATA  >  NZ_CP009273/2100108‑2100150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑