Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2137600	2137610	11	2 [1]	[1] 3	dgcE	diguanylate cyclase

TGTATGCCTTTCGTGCGGAACGCAAACACATTTCCGAAAGCGAAACCCACTTTCGGAACGCGATGGAATATTCCGCTATCGGTATGGCGT  >  NZ_CP009273/2137606‑2137695      |                                                                                     tGTATGCCTTTCGTGCGGAACGCAAACACATTTCCGAAAGCGAAACCCACTTTCGGAACGCGATGGAATATTCCGCTATCGGTATGGCGt  <  1:25215/90‑1 (MQ=255)      gCCTTTCGTGCGGAACGCAAACACATTTCCGAAAGCGAAACCCACTTTCGGAACGCGATGGAATATTCCGCTATCGGTATGGCGt  <  1:256940/85‑1 (MQ=255)      gCCTTTCGTGCGGAACGCAAACACATTTCCGAAAGCGAAACCCACTTTCGGAACGCGATGGAATATTCCGCTATCGGTATGGCGt  >  2:256940/1‑85 (MQ=255)      |                                                                                     TGTATGCCTTTCGTGCGGAACGCAAACACATTTCCGAAAGCGAAACCCACTTTCGGAACGCGATGGAATATTCCGCTATCGGTATGGCGT  >  NZ_CP009273/2137606‑2137695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑