Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1164393	1164439	47	2 [1]	[0] 2	comR/bhsA	TetR family copper‑responsive transcriptional repressor ComR/multiple stress resistance protein BhsA

TTGTATGTGATCCAGATCACATCTATCATTTAGTTATC  >  NZ_CP009273/1164440‑1164477 |                                      ttGTATGTGATCCAGATCACATCTATCATTTAGTTatc  >  1:175737/1‑38 (MQ=255) ttGTATGTGATCCAGATCACATCTATCATTTAGTTatc  <  2:175737/38‑1 (MQ=255) |                                      TTGTATGTGATCCAGATCACATCTATCATTTAGTTATC  >  NZ_CP009273/1164440‑1164477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑