Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2115970	2116003	34	2 [1]	[0] 3	cpsG	colanic acid biosynthesis phosphomannomutase CpsG

CACGCAGGTTGATTTGCTGATAGCGACCGCGTTTGGTTTCATCGACGGGAGGAAAGTCGTTGGCTTCAGCCAGACGCTGGACGTCGCGCA  >  NZ_CP009273/2116004‑2116093 |                                                                                          cACGCAGGTTGATTTGCTGATAGCGACCGCGTTTGGTTTCATCGACGGGAGGAAAGTCGTTGGCTTCAGCCAGACGCTGGACGTCgcgc   <  1:85303/89‑1 (MQ=255) cACGCAGGTTGATTTGCTGATAGCGACCGCGTTTGGTTTCATCGACGGGAGGAAAGTCGTTGGCTTCAGCCAGACGCTGGACGTCgcgc   >  2:85303/1‑89 (MQ=255) cACGCAGGTTGATTTGCTGATAGCGACCGCGTTTGGTTTCATCGACGGGAGGAAAGTCGTTGGCTTCAGCCAGACGCTGGACGTCGCGCa  >  1:311731/1‑90 (MQ=255) |                                                                                          CACGCAGGTTGATTTGCTGATAGCGACCGCGTTTGGTTTCATCGACGGGAGGAAAGTCGTTGGCTTCAGCCAGACGCTGGACGTCGCGCA  >  NZ_CP009273/2116004‑2116093

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑