Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2988539	2988660	122	3 [1]	[1] 3	BW25113_RS14850/BW25113_RS26010	response regulator transcription factor/hypothetical protein

TTCATTTATAATCATCCCTTCCATTATTATTATAAGCAAAATCCAAAGAATACATTGATGAAATAATAATGAAATATAATTAAAAATAAAATTTTTGCGTAA  >  NZ_CP009273/2988484‑2988585                                                       |                                                ttcattTATAATCATCCCTTCCATTATTATTATAAGCAAAATCCAAAGAATACAt                                                 >  1:105703/1‑55 (MQ=255) ttcattTATAATCATCCCTTCCATTATTATTATAAGCAAAATCCAAAGAATACAt                                                 <  2:105703/55‑1 (MQ=255)             catcCCTTCCATTATTATTATAAGCAAAATCCAAAGAATACATTGATGAAATAATAATGAAATATAATTAAAAATAAAATTTTTGCGTaa  >  2:2139/1‑90 (MQ=255)                                                       |                                                TTCATTTATAATCATCCCTTCCATTATTATTATAAGCAAAATCCAAAGAATACATTGATGAAATAATAATGAAATATAATTAAAAATAAAATTTTTGCGTAA  >  NZ_CP009273/2988484‑2988585

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑