| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 548215 = | 23 (1.160) | 4 (0.250) | 4/132 | 1.1 | 18.8% | coding (342/510 nt) | purE | 5‑(carboxyamino)imidazole ribonucleotide mutase |
| ? | NZ_CP009273 | 548231 = | 16 (1.010) | coding (326/510 nt) | purE | 5‑(carboxyamino)imidazole ribonucleotide mutase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTT > NZ_CP009273/548149‑548310 | aaTTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGAt < 2:18283/90‑1 (MQ=255) tttGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATgg < 2:140444/90‑1 (MQ=255) ctgcCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTaga < 1:59087/90‑1 (MQ=255) ctgcCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGAATTTGTACGATGGAGTaga < 1:212728/90‑1 (MQ=255) tgccagtacagagcgccgcactgagcggtgtcgatagcctctactccatcgtacaaatgccgcgcggcattTGTACGAt < 1:307192‑M2/8‑1 (MQ=255) tgccagtacagagcgccgcactgagcggtgtcgatagcctctactccatcgtacaaatgccgcgcggcattTGTACGAt > 2:307192‑M2/72‑79 (MQ=255) tgccagtacagagcgccgcactgagcggtgtcgatagcctctactccatcgtacaaatgccgcgcggcattTGTACGATGGAGTAGAgg < 2:376131‑M2/18‑1 (MQ=255) tgccagtacagagcgccgcactgagcggtgtcgatagcctctactccatcgtacaAATGCCGCGCGGCATTTGTACGATGGAGTAGAgg < 1:376131‑M1/34‑1 (MQ=255) ccAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGc < 2:2896/90‑1 (MQ=255) gTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTA‑CCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATc < 1:553458/90‑1 (MQ=255) tAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATc < 2:595806/90‑1 (MQ=255) cctcgTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGAt < 1:329645/67‑1 (MQ=255) cctcgTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGAt > 2:329645/4‑70 (MQ=255) gCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGctc < 2:514313/90‑1 (MQ=255) tCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGa < 1:318792/42‑1 (MQ=255) tCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGa > 2:318792/1‑42 (MQ=255) tCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCa < 1:370245/90‑1 (MQ=255) cctctactccatcgtacaaatgccgcgcggcattTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCa < 1:376131‑M2/55‑1 (MQ=255) cctctactccatcgtacaAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCa < 2:376131‑M1/71‑1 (MQ=255) cGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCCAg < 2:538117/90‑1 (MQ=255) atcgtacaAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCa < 1:307192‑M1/71‑1 (MQ=255) atcgtacaAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCa > 2:307192‑M1/9‑79 (MQ=255) cACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATc < 1:143638/45‑1 (MQ=255) cACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATc > 2:143638/1‑45 (MQ=255) ATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGctc < 2:580635‑M1/60‑1 (MQ=255) ATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGctc > 1:580635‑M1/1‑60 (MQ=255) gcgcggcattTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCa > 2:42998‑M2/11‑65 (MQ=255) gcgcggcattTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCa < 1:42998‑M2/55‑1 (MQ=255) GCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCCAGCACCGGCACCAGCGtttt < 2:23972‑M1/90‑1 (MQ=255) | AATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTT > NZ_CP009273/548149‑548310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |