Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3647059	3647077	19	5 [1]	[0] 3	BW25113_RS18165/slp	hypothetical protein/outer membrane lipoprotein Slp

GGCCACTGCCTAATGAAAAAGATATAAATTATGGGGTGGAAATAGAAATACCATCTGGTAAAAGAATTCGCTTATCAAATCATTACCAGAA  >  NZ_CP009273/3646970‑3647060                                                                                         |   ggCCACTGCCTAATGAAAAAGATATAAATTATGGGGTGGAAATAGAAATACCATCTGGTAAAAGAATTCGCTTATCAAATCATTACCAg    <  1:398109/89‑1 (MQ=255) ggCCACTGCCTAATGAAAAAGATATAAATTATGGGGTGGAAATAGAAATACCATCTGGTAAAAGAATTCGCTTATCAAATCATTACCAg    >  2:398109/1‑89 (MQ=255)  gCCACTGCCTAATGAAAAAGATATAAATTATGGGGTGGAAATAGAAATACCATCTGGTAAAAGAATTCGCTTATCAAATCATTACCAGaa  >  2:136017/1‑90 (MQ=255)                                                     aTCTGGTAAAAGAATTCGCTTATCAAATCATTACCAg    >  1:157488/1‑37 (MQ=255)                                                     aTCTGGTAAAAGAATTCGCTTATCAAATCATTACCAg    <  2:157488/37‑1 (MQ=255)                                                                                         |   GGCCACTGCCTAATGAAAAAGATATAAATTATGGGGTGGAAATAGAAATACCATCTGGTAAAAGAATTCGCTTATCAAATCATTACCAGAA  >  NZ_CP009273/3646970‑3647060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑