Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3797710	3797726	17	3 [1]	[0] 3	rfaS	LPS core biosynthesis protein RfaS

ATTAGTAATTAATTTTTTATTGAAAAATAGTGCCTCAAGTATACGAAGAGTCCAGCCAGATTGGTTTTCTTTGGTTATATCAACAATTAT  >  NZ_CP009273/3797727‑3797816 |                                                                                          attaGTAATTAATTTTTTATTGAAAAATAGTGCCTc                                                        <  1:224907/36‑1 (MQ=255) attaGTAATTAATTTTTTATTGAAAAATAGTGCCTc                                                        >  2:224907/1‑36 (MQ=255) attaGTAATTAATGTTTTATTGAAAAATAGTGCGGCAAGTATACGAAAAGTCCAGCCAGATTGGTTTTCTTTGGTTAACTCAAGAATtat  >  2:493269/1‑90 (MQ=255) |                                                                                          ATTAGTAATTAATTTTTTATTGAAAAATAGTGCCTCAAGTATACGAAGAGTCCAGCCAGATTGGTTTTCTTTGGTTATATCAACAATTAT  >  NZ_CP009273/3797727‑3797816

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑