Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2100179	2100202	24	2 [0]	[1] 2	wzy	O16 family O‑antigen polymerase

CTACGATGAATGCATAAGAGATGATAACCATAAAGACAATTTGCTTACCAGTATTCAGTATAATTGCAAAGATGAATACAATAAAAACAA  >  NZ_CP009273/2100089‑2100178                                                                                          | cTACGATGAATGCATAAGAGATGATAACCATAAAGACAATTTGCTTACCAGTATTCAGTATAATTGCAAAGATGAATACAATAAAAACaa  >  2:210987/1‑90 (MQ=255) cTACGATGAATGCATAAGAGATGATAACCATAAAGACAAATTGCTTACCAGTATTCAGTATAATTGCAAAGATGAATACAATAAAAACaa  >  2:410997/1‑90 (MQ=255)                                                                                          | CTACGATGAATGCATAAGAGATGATAACCATAAAGACAATTTGCTTACCAGTATTCAGTATAATTGCAAAGATGAATACAATAAAAACAA  >  NZ_CP009273/2100089‑2100178

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑