Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4466666	4466719	54	2 [1]	[1] 3	BW25113_RS22080	hypothetical protein

GATTTGGAATAAGTTGGTTGTATATGTCAATGAATTTAACTTAAGTAATCGAGAAAAAACAAATTTAATACAAAGGCTATTTGATAATGTTGAGTCTATATTTAATGAAGTACCTGTC  >  NZ_CP009273/4466576‑4466693                                                                                          |                             gATTTGGAATAAGTTGGTTGTATATGTCAATGAATTTAACTTAAGTAATCGAGAAAAAACAAATTTAATACAAAGGCTATTTGATAATGt                              <  1:352765/90‑1 (MQ=255)                             aaTGAATTTAACTTAAGTAATCGAGAAAAAACAAATTTAATACAAAGGCTATTTGATAATGTTGAGTCTATATTTAATGAAGTACCTGTc  <  2:54932/90‑1 (MQ=255)                                                                                          |                             GATTTGGAATAAGTTGGTTGTATATGTCAATGAATTTAACTTAAGTAATCGAGAAAAAACAAATTTAATACAAAGGCTATTTGATAATGTTGAGTCTATATTTAATGAAGTACCTGTC  >  NZ_CP009273/4466576‑4466693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑