Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 1,613,627 | T→A | V84E (GTG→GAG) | marR → | multiple antibiotic resistance transcriptional regulator MarR |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 1,613,627 | 0 | T | A | 100.0% | 40.1 / NA | 13 | V84E (GTG→GAG) | marR | multiple antibiotic resistance transcriptional regulator MarR |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (11/2); total (11/2) |
CTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCC > NZ_CP009273/1613543‑1613710 | cTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGAGGaaa > 1:97146/1‑90 (MQ=255) ccGGTTGAACTGAAAAAGGGATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGAGGAAAgg > 2:513587/1‑90 (MQ=255) ggTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGAGGAAAGGtt > 1:263647/1‑90 (MQ=255) aaCTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGAGGAAAGGTTGCCGa < 2:585123/90‑1 (MQ=255) aGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGAGGAAAGGTTGCCGAACCCGAATg > 1:558265/1‑90 (MQ=255) ggTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGAGGAAAGGTTGCCGAACCCGAATGa > 1:263208/1‑90 (MQ=255) gAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGAGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTaa < 2:97146/90‑1 (MQ=255) cACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGAGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAAc > 1:568391/1‑90 (MQ=255) cTGGATCGCCTGGTCTGTAAAGGCTGGGAGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCggcggc > 2:9148/1‑90 (MQ=255) tCGCCTGGTCTGTAAAGGCTGGGAGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGgcggcgcggc > 1:620081/1‑90 (MQ=255) gTAAAGGCTGGGAGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAAc > 2:34726/1‑90 (MQ=255) gCTGGGAGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGcc > 2:516086/1‑90 (MQ=255) gCTGGGAGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGcc > 2:629942/1‑90 (MQ=255) | CTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCC > NZ_CP009273/1613543‑1613710 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |