| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 2502173 | 36 (0.650) | 4 (0.080) | 4/146 | 3.5 | 10.4% | coding (733/966 nt) | glk | glucokinase |
| ? | NZ_CP009273 | = 2502211 | 37 (0.760) | coding (695/966 nt) | glk | glucokinase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTGGCAGGCGGTTGTCAGCTTT > NZ_CP009273/2502122‑2502296 | ccgcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATgcgc < 2:967793/90‑1 (MQ=255) cAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCgcggc > 1:1046296/1‑90 (MQ=255) cAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCgcggc > 2:149078/1‑90 (MQ=255) cAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCgcggc > 1:1146428/1‑90 (MQ=255) aaCACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCaa < 1:230575/90‑1 (MQ=255) cgccgcCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCgg > 2:255978/1‑90 (MQ=255) gccgccAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt > 1:434093/1‑90 (MQ=255) gccgccAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt > 1:443413/1‑90 (MQ=255) aaTGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTg < 2:90074/90‑1 (MQ=255) tCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTcag > 1:535524/1‑90 (MQ=255) ccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTcagcc > 1:950998/1‑90 (MQ=255) ccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTcagcc > 2:1474821/1‑90 (MQ=255) tGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAgcgcgc > 2:1311254/1‑90 (MQ=255) gAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGcgcgcg > 1:473174/1‑90 (MQ=255) aGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGt < 1:200670/90‑1 (MQ=255) aGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGt < 1:346265/90‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGtt < 2:1146428/90‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGtt < 2:1497016/90‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGtt < 1:219608/90‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGtt < 1:1041683/90‑1 (MQ=255) cgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTc < 1:361352/90‑1 (MQ=255) cgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTc < 1:99770/90‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAata < 2:10053/90‑1 (MQ=255) gccAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCttt < 1:1387571/90‑1 (MQ=255) aaaaCGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCa < 2:755167/54‑1 (MQ=255) aaaaCGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCa > 1:755167/1‑54 (MQ=255) aaaaCGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTgg > 2:1455841/1‑90 (MQ=255) gCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTgag < 2:443413/90‑1 (MQ=255) aCGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTGGc > 2:1106241/1‑90 (MQ=255) aCGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTGGc > 1:253368/1‑90 (MQ=255) aCGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTGGc > 1:389320/1‑90 (MQ=255) aCGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTGGc > 1:1227567/1‑90 (MQ=255) gCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTGGCAg > 1:677061/1‑90 (MQ=255) aGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat < 2:1553919/56‑1 (MQ=255) aGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat > 1:1553919/1‑56 (MQ=255) aGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTATGGCTTGAGATTTTCTGGCAGGCGGGTg > 2:1296045/1‑90 (MQ=255) gACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTGGCAGGCGGTTGTCa < 1:701827/90‑1 (MQ=255) aCAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTGGCAGGCGGTTGTCAg > 2:1087618/1‑90 (MQ=255) aaTGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTGGCAGGCGGTTGTCAGCt < 2:16685/90‑1 (MQ=255) aaTGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTGGCAGGCGGTTGTCAGCt > 2:1208807/1‑90 (MQ=255) aaTGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTGGCAGGCGGTTGTCAGCt < 2:959063/90‑1 (MQ=255) tGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTGGCAGGCGGTTGTCAGCttt > 2:1408108/1‑90 (MQ=255) | CCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTGGCAGGCGGTTGTCAGCTTT > NZ_CP009273/2502122‑2502296 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |