Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1157691	1157693	3	5 [0]	[1] 2	hinT	purine nucleoside phosphoramidase

GAATACCAACCGCCATGGCGGACAAGAGGTTTACCACATCCATATGCACTTGTTGGGTGGCCGTCCGCTGGGACCAATGCTGGCGCATAA  >  NZ_CP009273/1157601‑1157690                                                                                          | gAATACCAACCGCCATGGCGGACAAGAGGTTTACCACATCCATATGCACTTGTTGGGTGGCCGTCCGCTGGGACCAATGCTGGCGCATaa  <  1:219932/90‑1 (MQ=255)      ccAACCGCCATGGCGGACAAGAGGTTTACCACATCCATATGCACTTGTTGGGTGGCCGTCCGCTGGGACCAATGCTGGCGCATaa  <  1:122104/85‑1 (MQ=255)      ccAACCGCCATGGCGGACAAGAGGTTTACCACATCCATATGCACTTGTTGGGTGGCCGTCCGCTGGGACCAATGCTGGCGCATaa  >  2:122104/1‑85 (MQ=255)                                                   tgttgGGTGGCCGTCCGCTGGGACCAATGCTGGCGCATaa  >  1:227100/1‑40 (MQ=255)                                                   tgttgGGTGGCCGTCCGCTGGGACCAATGCTGGCGCATaa  <  2:227100/40‑1 (MQ=255)                                                                                          | GAATACCAACCGCCATGGCGGACAAGAGGTTTACCACATCCATATGCACTTGTTGGGTGGCCGTCCGCTGGGACCAATGCTGGCGCATAA  >  NZ_CP009273/1157601‑1157690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑