Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1876271	1876324	54	3 [1]	[0] 2	dmlA	multifunctional D‑malate/3‑isopropylmalate/tartarate dehydrogenase

ATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAA  >  NZ_CP009273/1876181‑1876295                                                                                          |                          aTGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTgg                           >  2:319554/1‑90 (MQ=255) aTGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCCGAAGGGATTCGCGGGTTACAGGCTCgcgctgggcgctgg                           >  2:315259/1‑90 (MQ=255)                          aCGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCaaa  >  1:89667/1‑90 (MQ=255)                                                                                          |                          ATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAA  >  NZ_CP009273/1876181‑1876295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑