Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1067003	1067067	65	3 [1]	[1] 2	rutD	pyrimidine utilization protein D

CTTCTGCCAGCGTGTCGGGATTATTGCCGGTGCCGCGCTGGTCGTAACAGACTACCTGATACTCCTGCTCCAGCACCGCCAGTTGCGGTAACCAGTAACTGCCGCTACCCCCAA  >  NZ_CP009273/1067044‑1067157                         |                                                                                          cttctGCCAGCGTGTCGGGATTATTGCCGGTGCCGCGCTGGTCGTAACAGACTACCTGATACTCCTGCTCCAGCACCGCCAGTTGCGGTa                          >  2:205440/1‑90 (MQ=255)                         tGCCGGTGCCGCGCTGGTCGTAACAGACTACCTGATCCTCCTGCTCCAGCACCGCCAGTTGCGGTAACCAGTAACTGCCGCTACCCCCaa  <  2:164838/90‑1 (MQ=255)                         |                                                                                          CTTCTGCCAGCGTGTCGGGATTATTGCCGGTGCCGCGCTGGTCGTAACAGACTACCTGATACTCCTGCTCCAGCACCGCCAGTTGCGGTAACCAGTAACTGCCGCTACCCCCAA  >  NZ_CP009273/1067044‑1067157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑