Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1068184	1068194	11	3 [0]	[1] 2	rutB	peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB

TTGAGACATCAAACCCGGCGAGATCTAAGTAGCCGCCTGGCGTGGCATAAGCGTTTTGCATATCCACCACGATCAGCGCACTTTGCTGCGGATCGAAG  >  NZ_CP009273/1068187‑1068284         |                                                                                          ttGAGACATCAAACCCGGCGAGATCTAAGTAGCCGCCTGGCGTGGCATAAGCGTTTTGCATATCCACCACGATCAGCGCACTTTGCTGCg          >  1:15052/1‑90 (MQ=255)         tCAAACCCGGCGAGATCTAAGTAGCCGCCTGGCGTGGCATAAGCGTTTTGCATATCCACCACGATCAGCGCACTTTGCTGCGGATCGAAg  >  2:254759/1‑90 (MQ=255)         |                                                                                          TTGAGACATCAAACCCGGCGAGATCTAAGTAGCCGCCTGGCGTGGCATAAGCGTTTTGCATATCCACCACGATCAGCGCACTTTGCTGCGGATCGAAG  >  NZ_CP009273/1068187‑1068284

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑